Papers

2018

Geisen S, Bonkowski M (2018) Methodological advances to study the diversity of soil protists and their functioning in soil food webs. Applied Soil Ecology (in press)
Methodology: overview of applicable methods to study soil protists
Vestergård M, Bang-Andreasen T, Buss SM, Cruz-Paredes C, Bentzon-Tilia S, Ekelund F, Kjøller R, Mortensen LH, Rønn R 2017 The relative importance of the bacterial pathway and soil organic nitrogen increase across an extreme wood-ash application gradient. 
Soil food web interactions
Xiong W, Jousset A, Guo S, Karlsson I, Zhao Q, Wu H, Kowalchuk GA, Shen Q, Li R, Geisen S (2017) Soil protist communities form a dynamic hub in the soil microbiome. ISME J 12 634–638
Ecology: integration of protists in the microbiome with bacteria and fungi in different fertilization regimes

2017

Alekperov I.Kh., Snegovaya N.Yu., Tahirova E.N.  The cadastre of free-living ciliates and testate amoebae of Azerbaijan. Protistology 11 (2) 57–129 (2017)
Ecology
Berney, C., Ciuprina, A., Bender, S., Brodie, J., Edgcomb, V., Kim, E., Rajan, J., Parfrey, L.W., Adl, S., Audic, S., Bass, D., Caron, D.A., Cochrane, G., Czech, L., Dunthorn, M., Geisen, S., Glöckner, F.O., Mahé, F., Quast, C., Kaye, J.Z., Simpson, A.G.B., Stamatakis, A., del Campo, J., Yilmaz, P., de Vargas, C., 2017. UniEuk: Time to Speak a Common Language in Protistology! Journal of Eukaryotic Microbiology, 64, 407-11
Taxonomy
Geisen, S., Mitchell, E.A.D., Wilkinson, D.M., Adl, S., Bonkowski, M., Brown, M.W., Fiore-Donno, A.M., Heger, T.J., Jassey, V.E.J., Krashevska, V., Lahr, D.J.G., Marcisz, K., Mulot, M., Payne, R., Singer, D., Anderson, O.R., Charman, D.J., Ekelund, F., Griffiths, B.S., Rønn, R., Smirnov, A., Bass, D., Belbahri, L., Berney, C., Blandenier, Q., Chatzinotas, A., Clarholm, M., Dunthorn, M., Feest, A., Fernández, L.D., Foissner, W., Fournier, B., Gentekaki, E., Hájek, M., Helder, J., Jousset, A., Koller, R., Kumar, S., La Terza, A., Lamentowicz, M., Mazei, Y., Santos, S.S., Seppey, C.V.W., Spiegel, F.W., Walochnik, J., Winding, A., Lara, E., 2017. Soil protistology rebooted: 30 fundamental questions to start with. Soil Biology and Biochemistry 111, 94-103.
Opinion Paper about all aspects of soil protists
Mahé F, de Vargas C, Bass D, Czech L, Stamatakis A, Lara E, Singer D, Mayor J, Bunge J, Sernaker S, Siemensmeyer T, Trautmann I, Romac S, Berney C, Kozlov A, Mitchell EAD, Seppey CVW, Egge E, Lentendu G, Wirth R, Trueba G, Dunthorn M. Parasites dominate h
Ecology
Mazei Yu., Chernyshov V., Bukhkalo S.,  Mazei N., Creevy A., Payne R. Exploring the ecology of testate amoebae in peatlands of Western Siberia // Acta Protozoologica. 2017.Vol. 56. №1. P. 59–70.
Ecology
Qin Y., Payne R., Gu. Y., Mazei Yu., Xie Sh. Short-term response of testate amoebae to wildfire // Applied Soil Ecology. 2017. Vol. 116. P. 64-69.
Ecology
Ratcliffe J., Creevy A., Andersen R., Zarov E., Gaffney P., Taggart M., Mazei Yu., Tsyganov A., Rowson J., Lapshina E.D., Payne R. Ecological and environmental transition across the forested-to-open bog ecotone in a West Siberian peatland // Science of th
Ecology
Schulz-Bohm, K., Geisen, S., Wubs, E.R.J., Song, C., de Boer, W., Garbeva, P., 2017. The prey’s scent – Volatile organic compound mediated interactions between soil bacteria and their protist predators. ISME J 11, 817–820.
Protist-Bacterial interactions
Seppey, C.V.W., Singer, D., Dumack, K., Fournier, B., Belbahri, L., Mitchell, E.A.D., Lara, E., 2017. Distribution patterns of soil microbial eukaryotes suggests widespread algivory by phagotrophic protists as an alternative pathway for nutrient cycling. 
Soil carbon cycling
Shimano S., Bobrov A., Wanner M., Lamentowicz M., Mazei Yu., Ohtsuka T. Testate amoeba diversity of a poor fen on mineral soil in the hilly area of Central Honshu, Japan // Acta Protozoologica. 2017. Vol. 56. №3. P. 215–220.
Biodiversity
Smirnov, A., Nassonova, E., Geisen, S., Bonkowski, M., Kudryavtsev, A., Berney, C., Glotova, A., Bondarenko, N., Dyková, I., Mrva, M., Fahrni, J., Pawlowski, J., 2017. Phylogeny and Systematics of Leptomyxid Amoebae (Amoebozoa, Tubulinea, Leptomyxida). Protist 168, 220-252
Taxonomy

 

Before 2017

Biogeography/Distribution

Diversity/Community Structure

Ecological Functions/Interactions

Taxonomy/Phylogeny

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Increasing and sharing knowledge on soil protists and transferring it outside the field of soil protistologists to a wider audience

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